I have Koni shocks on my ride, and they are worth the extra cash. I strongly believe shocks have a major impact on how your car handles on the street or track.
However, if I were to do it all over again, I'd probably go with Bilstein shocks. Seems like many of the informed performance Mustang suppliers (Street or Track & Maier Racing, just to name a couple) are going with Bilsteins these days.